template/nonrigidregister.hh
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1 /* -*- mia-c++ -*-
2  *
3  * This file is part of MIA - a toolbox for medical image analysis
4  * Copyright (c) Leipzig, Madrid 1999-2013 Gert Wollny
5  *
6  * MIA is free software; you can redistribute it and/or modify
7  * it under the terms of the GNU General Public License as published by
8  * the Free Software Foundation; either version 3 of the License, or
9  * (at your option) any later version.
10  *
11  * This program is distributed in the hope that it will be useful,
12  * but WITHOUT ANY WARRANTY; without even the implied warranty of
13  * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
14  * GNU General Public License for more details.
15  *
16  * You should have received a copy of the GNU General Public License
17  * along with MIA; if not, see <http://www.gnu.org/licenses/>.
18  *
19  */
20 
21 #ifndef mia_internal_nonrigidregister_hh
22 #define mia_internal_nonrigidregister_hh
23 
24 #include <mia/core/minimizer.hh>
27 #include <mia/template/dimtrait.hh>
29 
31 
32 template <int dim>
34 
50 template <int dim>
52 public:
54  typedef dimension_traits<dim> this_dim_traits;
55 
57  typedef typename this_dim_traits::PTransformation PTransformation;
58 
60  typedef typename this_dim_traits::Image Image;
61 
63  typedef typename this_dim_traits::PImage PImage;
64 
66  typedef typename this_dim_traits::PTransformationFactory PTransformationFactory;
67 
69  typedef typename this_dim_traits::FullCostList FullCostList;
70 
72  typedef typename this_dim_traits::Filter Filter;
73 
75  typedef typename this_dim_traits::FilterPluginHandler FilterPluginHandler;
76 
86  TNonrigidRegister(FullCostList& costs, PMinimizer minimizer,
87  PTransformationFactory transform_creation,
88  size_t mg_levels, int idx = -1);
89 
90 
92 
93 
98  void set_refinement_minimizer(PMinimizer minimizer);
99 
100 
108  PTransformation run(PImage src, PImage ref) const;
109 
110 
116  PTransformation run() const;
117 
118 private:
119  struct TNonrigidRegisterImpl<dim> *impl;
120 };
121 
123 
124 #endif